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1

Electrically Assisted Turbocharging for High-performance Off-highway Engines

Kech, Johannes, Rappsilber, Rudi, Thiesemann, Joachim

Journal:

MTZ worldwide eMagazine

Year:

2019

Language:

english

File:

PDF, 1.58 MB

english, 2019

2

Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

Rappsilber, Juri, Mann, Matthias, Ishihama, Yasushi

Journal:

Nature Protocols

Year:

2007

Language:

english

File:

PDF, 355 KB

english, 2007

3

Stc1: A Critical Link between RNAi and Chromatin Modification Required for Heterochromatin Integrity

Elizabeth H. Bayne, Sharon A. White, Alexander Kagansky, Dominika A. Bijos, Luis Sanchez-Pulido, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Chris P. Ponting, Juri Rappsilber, Robin C. Allshire

Journal:

Year:

2010

Language:

english

File:

PDF, 1.11 MB

english, 2010

4

Nascent chromatin capture proteomics determines chromatin dynamics during DNA replication and identifies unknown fork components

Alabert, Constance, Bukowski-Wills, Jimi-Carlo, Lee, Sung-Bau, Kustatscher, Georg, Nakamura, Kyosuke, de Lima Alves, Flavia, Menard, Patrice, Mejlvang, Jakob, Rappsilber, Juri, Groth, Anja

Journal:

Nature Cell Biology

Year:

2014

Language:

english

File:

PDF, 2.59 MB

english, 2014

5

Sister kinetochores are mechanically fused during meiosis I in yeast

Sarangapani, K. K., Duro, E., Deng, Y., Alves, F. d. L., Ye, Q., Opoku, K. N., Ceto, S., Rappsilber, J., Corbett, K. D., Biggins, S., Marston, A. L., Asbury, C. L.

Journal:

Year:

2014

Language:

english

File:

PDF, 650 KB

english, 2014

6

A Single α Helix Drives Extensive Remodeling of the Proteasome Lid and Completion of Regulatory Particle Assembly

R. Tomko, D. Taylor, Z. Chen, H. Wang, J. Rappsilber, M. Hochstrasser

Year:

2015

Language:

english

File:

PDF, 4.05 MB

english, 2015

7

Quantitative Cross-linking/Mass Spectrometry Using Isotope-labeled Cross-linkers and MaxQuant

Chen, Zhuo A., Fischer, Lutz, Cox, Jürgen, Rappsilber, Juri

Journal:

Molecular & Cellular Proteomics

Year:

2016

Language:

english

File:

PDF, 1.09 MB

english, 2016

8

14-3-3 regulation of Ncd reveals a new mechanism for targeting proteins to the spindle in oocytes

Beaven, Robin, Bastos, Ricardo Nunes, Spanos, Christos, Romé, Pierre, Cullen, C. Fiona, Rappsilber, Juri, Giet, Régis, Goshima, Gohta, Ohkura, Hiroyuki

Journal:

The Journal of Cell Biology

Year:

2017

Language:

english

File:

PDF, 1.80 MB

english, 2017

9

Design fires with mixed-material burning cribs to determine the extinguishing effects of compressed air foams

Rappsilber, Tim, Krüger, Simone

Journal:

Fire Safety Journal

Year:

2018

Language:

english

File:

PDF, 3.03 MB

english, 2018

10

JAMI: a Java library for molecular interactions and data interoperability

Sivade, M., Koch, M., Shrivastava, A., Alonso-López, D., De Las Rivas, J., del-Toro, N., Combe, C. W., Meldal, B. H. M., Heimbach, J., Rappsilber, J., Sullivan, J., Yehudi, Y., Orchard, S.

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.31 MB

english, 2018

11

xiSPEC: web-based visualization, analysis and sharing of proteomics data

Kolbowski, Lars, Combe, Colin, Rappsilber, Juri

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 516 KB

english, 2018

12

Cross-linking mass spectrometry: methods and applications in structural, molecular and systems biology

O’Reilly, Francis J., Rappsilber, Juri

Journal:

Nature Structural and Molecular Biology

Year:

2018

Language:

english

File:

PDF, 1.64 MB

english, 2018

13

Data-independent acquisition improves quantitative cross-linking mass spectrometry

Müller, Fränze, Kolbowski, Lars, Bernhardt, Oliver M., Reiter, Lukas, Rappsilber, Juri

Journal:

Molecular & Cellular Proteomics

Year:

2019

Language:

english

File:

PDF, 863 KB

english, 2019

14

Seismic tomography on the castle hill in Quedlinburg

Schicht, Th., Lindner, U., Heckner, J., Strobel, G., Rappsilber, I.

Journal:

Near Surface Geophysics

Year:

2007

Language:

english

File:

PDF, 5.34 MB

english, 2007

15

Microtubule Nucleation Properties of Single Human Î³TuRCs Explained by Their Cryo-EM Structure

Consolati, Tanja, Locke, Julia, Roostalu, Johanna, Chen, Zhuo Angel, Gannon, Julian, Asthana, Jayant, Lim, Wei Ming, Martino, Fabrizio, Cvetkovic, Milos A., Rappsilber, Juri, Costa, Alessandro, Surrey

Journal:

Developmental Cell

Year:

2020

File:

PDF, 7.12 MB

2020

16

Labile sulfogroup allows differentiation of sulfotyrosine and phosphotyrosine in peptides

Juri Rappsilber, Hanno Steen, Matthias Mann

Journal:

Journal of Mass Spectrometry

Year:

2001

Language:

english

File:

PDF, 70 KB

english, 2001

17

Microcolumns with self-assembled particle frits for proteomics

Yasushi Ishihama, Juri Rappsilber, Jens S Andersen, Matthias Mann

Journal:

Journal of Chromatography A

Year:

2002

Language:

english

File:

PDF, 511 KB

english, 2002

18

Experiences and perspectives of MALDI MS and MS/MS in proteomic research

Juri Rappsilber, Marc Moniatte, Michael L Nielsen, Alexandre V Podtelejnikov, Matthias Mann

Journal:

International Journal of Mass Spectrometry

Year:

2003

Language:

english

File:

PDF, 225 KB

english, 2003

19

Sequence tag scanning: A new explorative strategy for recognition of unexpected protein alterations by nanoelectrospray ionization-tandem mass spectrometry

Mogjiborahman Salek, Vincenzo Di Bartolo, Davide Cittaro, Dario Borsotti, Junhua Wei, Oreste Acuto, Juri Rappsilber, Wolf D. Lehmann

Journal:

Year:

2005

Language:

english

File:

PDF, 609 KB

english, 2005

20

Spot overlapping in two-dimensional maps: A serious problem ignored for much too long

Natascia Campostrini, Liliana B. Areces, Juri Rappsilber, Maria Chiara Pietrogrande, Francesco Dondi, Fabio Pastorino, Mirco Ponzoni, Pier Giorgio Righetti

Journal:

Year:

2005

Language:

english

File:

PDF, 342 KB

english, 2005

21

Self-made frits for nanoscale columns in proteomics

Alessio Maiolica, Dario Borsotti, Juri Rappsilber

Journal:

Year:

2005

Language:

english

File:

PDF, 215 KB

english, 2005

22

Proteomic profiling of PrP27-30-enriched preparations extracted from the brain of hamsters with experimental scrapie

Alessandra Giorgi, Laura Di Francesco, Serena Principe, Giuseppina Mignogna, Lau Sennels, Carmine Mancone, Tonino Alonzi, Marco Sbriccoli, Angela De Pascalis, Juri Rappsilber, Franco Cardone, Maurizio

Journal:

Year:

2009

Language:

english

File:

PDF, 456 KB

english, 2009

23

When less can yield more – Computational preprocessing of MS/MS spectra for peptide identification

Bernhard Y. Renard, Marc Kirchner, Flavio Monigatti, Alexander R. Ivanov, Juri Rappsilber, Dominic Winter, Judith A. J. Steen, Fred A. Hamprecht, Hanno Steen

Journal:

Year:

2009

Language:

english

File:

PDF, 253 KB

english, 2009

24

10.1038/1700

Mann, Matthias, Neubauer, Gitte, King, Angus, Rappsilber, Juri, Calvio, Cinzia, Watson, Mark, Ajuh, Paul, Sleeman, Judith, Lamond, Angus

Journal:

Nature Genetics

Year:

1998

Language:

english

File:

PDF, 161 KB

english, 1998

25

Pre-mRNA splicing and mRNA export linked by direct interactions between UAP56 and Aly

Luo, Ming-Juan, Zhou, Zhaolan, Magni, Keith, Christoforides, Claudine, Rappsilber, Juri, Mann, Matthias, Reed, Robin

Journal:

Year:

2001

Language:

english

File:

PDF, 203 KB

english, 2001

26

The putative oncogene GASC1 demethylates tri- and dimethylated lysine 9 on histone H3

Cloos, Paul A. C., Christensen, Jesper, Agger, Karl, Maiolica, Alessio, Rappsilber, Juri, Antal, Torben, Hansen, Klaus H., Helin, Kristian

Journal:

Year:

2006

Language:

english

File:

PDF, 725 KB

english, 2006

27

UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development

Agger, Karl, Cloos, Paul A. C., Christensen, Jesper, Pasini, Diego, Rose, Simon, Rappsilber, Juri, Issaeva, Irina, Canaani, Eli, Salcini, Anna Elisabetta, Helin, Kristian

Journal:

Year:

2007

Language:

english

File:

PDF, 804 KB

english, 2007

28

JARID2 regulates binding of the Polycomb repressive complex 2 to target genes in ES cells

Pasini, Diego, Cloos, Paul A. C., Walfridsson, Julian, Olsson, Linda, Bukowski, John-Paul, Johansen, Jens V., Bak, Mads, Tommerup, Niels, Rappsilber, Juri, Helin, Kristian

Journal:

Year:

2010

Language:

english

File:

PDF, 632 KB

english, 2010

29

TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity

Williams, Kristine, Christensen, Jesper, Pedersen, Marianne Terndrup, Johansen, Jens V., Cloos, Paul A. C., Rappsilber, Juri, Helin, Kristian

Journal:

Year:

2011

Language:

english

File:

PDF, 504 KB

english, 2011

30

A model for transmission of the H3K27me3 epigenetic mark

Hansen, Klaus H., Bracken, Adrian P., Pasini, Diego, Dietrich, Nikolaj, Gehani, Simmi S., Monrad, Astrid, Rappsilber, Juri, Lerdrup, Mads, Helin, Kristian

Journal:

Nature Cell Biology

Year:

2008

Language:

english

File:

PDF, 217 KB

english, 2008

31

A model for transmission of the H3K27me3 epigenetic mark

Hansen, Klaus H., Bracken, Adrian P., Pasini, Diego, Dietrich, Nikolaj, Gehani, Simmi S., Monrad, Astrid, Rappsilber, Juri, Lerdrup, Mads, Helin, Kristian

Journal:

Nature Cell Biology

Year:

2008

Language:

english

File:

PDF, 3.35 MB

english, 2008

32

Bypass of senescence by the polycomb group protein CBX8 through direct binding to the INK4A-ARF locus

Dietrich, Nikolaj, Bracken, Adrian P, Trinh, Emmanuelle, Schjerling, Charlotte K, Koseki, Haruhiko, Rappsilber, Juri, Helin, Kristian, Hansen, Klaus H

Journal:

The EMBO Journal

Year:

2007

Language:

english

File:

PDF, 584 KB

english, 2007

33

Phosphodependent Recruitment of Bub1 and Bub3 to Spc7/KNL1 by Mph1 Kinase Maintains the Spindle Checkpoint

Lindsey A. Shepperd, John C. Meadows, Alicja M. Sochaj, Theresa C. Lancaster, Juan Zou, Graham J. Buttrick, Juri Rappsilber, Kevin G. Hardwick, Jonathan B.A. Millar

Journal:

Current Biology

Year:

2012

Language:

english

File:

PDF, 1.39 MB

english, 2012

34

Model for stathmin/OP18 binding to tubulin

Wallon, Gerlind, Rappsilber, Juri, Mann, Matthias, Serrano, Luis

Journal:

The EMBO Journal

Year:

2000

Language:

english

File:

PDF, 400 KB

english, 2000

35

Building mitotic chromosomes

Shinya Ohta, Laura Wood, Jimi-Carlo Bukowski-Wills, Juri Rappsilber, William C Earnshaw

Journal:

Current Opinion in Cell Biology

Year:

2011

Language:

english

File:

PDF, 357 KB

english, 2011

36

Kinase Activity of Fission Yeast Mph1 Is Required for Mad2 and Mad3 to Stably Bind the Anaphase Promoting Complex

Judith Zich, Alicja M. Sochaj, Heather M. Syred, Laura Milne, Atlanta G. Cook, Hiro Ohkura, Juri Rappsilber, Kevin G. Hardwick

Journal:

Current Biology

Year:

2012

Language:

english

File:

PDF, 661 KB

english, 2012

37

What does it mean to identify a protein in proteomics?

Juri Rappsilber, Matthias Mann

Journal:

Trends in Biochemical Sciences

Year:

2002

Language:

english

File:

PDF, 846 KB

english, 2002

38

Improved results in proteomics by use of local and peptide-class specific false discovery rates

Lau Sennels, Jimi-Carlo Bukowski-Wills, Juri Rappsilber

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 1.19 MB

english, 2009

39

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

Journal:

Year:

2008

Language:

english

File:

PDF, 1.01 MB

english, 2008

40

Purification and characterization of the 1.0 MDa CCR4-NOT complex identifies two novel components of the complex

Junji Chen, Juri Rappsilber, Yueh-Chin Chiang, Pamela Russell, Matthias Mann, Clyde L Denis

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 378 KB

english, 2001

41

RBP2 Belongs to a Family of Demethylases, Specific for Tri-and Dimethylated Lysine 4 on Histone 3

Jesper Christensen, Karl Agger, Paul A.C. Cloos, Diego Pasini, Simon Rose, Lau Sennels, Juri Rappsilber, Klaus H. Hansen, Anna Elisabetta Salcini, Kristian Helin

Journal:

Year:

2007

Language:

english

File:

PDF, 1.63 MB

english, 2007

42

Repo-Man Coordinates Chromosomal Reorganization with Nuclear Envelope Reassembly during Mitotic Exit

Paola Vagnarelli, Susana Ribeiro, Lau Sennels, Luis Sanchez-Pulido, Flavia de Lima Alves, Toon Verheyen, David A. Kelly, Chris P. Ponting, Juri Rappsilber, William C. Earnshaw

Journal:

Developmental Cell

Year:

2011

Language:

english

File:

PDF, 2.81 MB

english, 2011

43

Unrip is a component of SMN complexes active in snRNP assembly

Claudia Carissimi, Jennifer Baccon, Marco Straccia, Pieranna Chiarella, Alessio Maiolica, Alan Sawyer, Juri Rappsilber, Livio Pellizzoni

Journal:

Year:

2005

Language:

english

File:

PDF, 406 KB

english, 2005

44

The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes

Juri Rappsilber

Journal:

Journal of Structural Biology

Year:

2011

Language:

english

File:

PDF, 1.09 MB

english, 2011

45

Fission Yeast Scm3: A CENP-A Receptor Required for Integrity of Subkinetochore Chromatin

Alison L. Pidoux, Eun Shik Choi, Johanna K.R. Abbott, Xingkun Liu, Alexander Kagansky, Araceli G. Castillo, Georgina L. Hamilton, William Richardson, Juri Rappsilber, Xiangwei He, Robin C. Allshire

Journal:

Year:

2009

Language:

english

File:

PDF, 1.40 MB

english, 2009

46

A Functional Link between the Histone Demethylase PHF8 and the Transcription Factor ZNF711 in X-Linked Mental Retardation

Daniela Kleine-Kohlbrecher, Jesper Christensen, Julien Vandamme, Iratxe Abarrategui, Mads Bak, Niels Tommerup, Xiaobing Shi, Or Gozani, Juri Rappsilber, Anna Elisabetta Salcini, Kristian Helin

Journal:

Year:

2010

Language:

english

File:

PDF, 1.22 MB

english, 2010

47

A novel combination of chemical cross-linking, mass spectrometry and NMR reveals the architecture of complement component C7

Carla Clark, Marie Phelan, Zhuo Chen, Juri Rappsilber, Ronald Ogata, Janice Bramham, Paul Barlow

Journal:

Molecular Immunology

Year:

2008

Language:

english

File:

PDF, 68 KB

english, 2008

48

A novel in vitro metabolomics approach for neurotoxicity testing, proof of principle for methyl mercury chloride and caffeine

Erwin van Vliet, Siegfried Morath, Chantra Eskes, Jens Linge, Juri Rappsilber, Paul Honegger, Thomas Hartung, Sandra Coecke

Journal:

NeuroToxicology

Year:

2008

Language:

english

File:

PDF, 2.04 MB

english, 2008

49

Mitotic chromosomes are compacted laterally by KIF4 and condensin and axially by topoisomerase II

Samejima, K., Samejima, I., Vagnarelli, P., Ogawa, H., Vargiu, G., Kelly, D. A., de Lima Alves, F., Kerr, A., Green, L. C., Hudson, D. F., Ohta, S., Cooke, C. A., Farr, C. J., Rappsilber, J., Earnshaw

Journal:

The Journal of Cell Biology

Year:

2012

Language:

english

File:

PDF, 3.82 MB

english, 2012

50

Modular Stop and Go Extraction Tips with Stacked Disks for Parallel and Multidimensional Peptide Fractionation in Proteomics

Ishihama, Yasushi, Rappsilber, Juri, Mann, Matthias

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 677 KB

english, 2006